{"id":55,"date":"2016-04-04T19:52:29","date_gmt":"2016-04-04T10:52:29","guid":{"rendered":"https:\/\/bioinformatician.org\/glab\/?page_id=55"},"modified":"2026-02-24T09:47:37","modified_gmt":"2026-02-24T00:47:37","slug":"publications","status":"publish","type":"page","link":"https:\/\/bioinformatician.org\/glab\/publications\/","title":{"rendered":"\u7814\u7a76\u696d\u7e3e"},"content":{"rendered":"

[et_pb_section fb_built=”1″ admin_label=”\u30bb\u30af\u30b7\u30e7\u30f3” _builder_version=”4.16″ global_colors_info=”{}”][et_pb_row admin_label=”\u884c” _builder_version=”4.16″ background_size=”initial” background_position=”top_left” background_repeat=”repeat” width=”89.5%” min_height=”13752.5px” custom_margin=”1px|719px||93px||” custom_padding=”|4px||||” global_colors_info=”{}”][et_pb_column type=”4_4″ _builder_version=”4.16″ custom_padding=”|||” global_colors_info=”{}” custom_padding__hover=”|||”][et_pb_text admin_label=”\u30c6\u30ad\u30b9\u30c8” _builder_version=”4.20.2″ text_line_height=”1.8em” background_size=”initial” background_position=”top_left” background_repeat=”repeat” width=”100%” custom_margin=”1px|-7px||||” custom_padding=”|0px||||” hover_enabled=”0″ use_border_color=”off” border_color=”#ffffff” border_style=”solid” inline_fonts=”Georgia,Nunito,Orienta” global_colors_info=”{}” sticky_enabled=”0″]<\/p>\n

 <\/p>\n

Publications<\/span>\u00a0<\/span><\/p>\n

 <\/p>\n

    \n
  1. Shinomiya\u00a0A,\u00a0Oshibuchi\u00a0K,\u00a0Yang\u00a0J,\u00a0Fukuda\u00a0S,\u00a0Arakawa\u00a0K<\/strong><\/span>, \u201cComplete genome sequence of\u00a0Solobacterium moorei<\/em>\u00a010714-02 isolated from the stool of a human colorectal cancer patient\u201d,\u00a0Microbiol Resour Announc<\/em>, inPress:e00981-25.(Publisher<\/a>)<\/li>\n
  2. Arakawa K<\/strong><\/span>, Kato N, Tanikawa A, \u201cDescription and genome sequencing of Olios ishikawatodaorum n. sp. (Arachnida: Araneae: Sparassidae) from Aichi, Japan\u201d,\u00a0Acta Arachnologica<\/em>,\u00a02025,74<\/strong>(1):1-8. (Publisher<\/a>)<\/span><\/li>\n
  3. Yag H, Saito T, Guu S, Yamakawa N, Shimamura S, \u00a0Kondo S, Yagi-Utsumi M, Takai K, Furukawa J, Guerardel Y, Khoo K, Arakawa K<\/strong><\/span>, Kato K, <\/strong><\/span><\/span>\u00a0\u201cUncommon\u00a0N-Glycan Structures in Anhydrobiotic Tardigrades\u201d,\u00a0Molecular & Cellular Proteomics<\/em>,\u00a02025, 100979. (Publisher<\/a>)<\/li>\n
  4. Iwai H<\/strong><\/span>, \u00a0Kurihara Y, Kono N, Hojo M K, Yamaguchi K, Shigenobu S, Ozaki M, Koto A, Arakawa K<\/strong><\/span>, \u201c\u00a0Genome assembly of the temporary socially parasitic spiny ant\u00a0Polyrhachis lamellidens\u00a0and its host\u00a0Camponotus japonicus\u201d, DNA Research<\/em>, 2025, 32<\/strong>(2), dsaf005. (Publisher<\/a>)<\/span><\/li>\n
  5. Ishida N, Harada S, Toki R, Hirata A, Matsumoto M, Miyagawa N, Iida M, Edagawa S, Miyake A, Kuwabara, K, Shibuki T, Kato S, Arakawa K<\/strong><\/span>, Kinoshita K, Sakurai-Yageta M, Tamiya G, Nagashima K, Muraoka H, Sato Y, Takebayashi T, \u201cCausal relationship between body mass index and insulin resistance: Linear and nonlinear Mendelian randomization study in a Japanese population\u201d,\u00a0J Diabetes Investigation<\/em> 2025,14377.(Publisher<\/a>).<\/span><\/li>\n
  6. \n
  7. \n
  8. \n
  9. Tsukimi T, Obana N, Shigemori S, Arakawa<\/strong> <\/span>K, Miyauchi E, Yang J, Song I, Ashino Y, Wakayama M, Soga T, Tomita M,\u00a0Ohno H, Mori H, Fukuda S, \u201c Genetic mutation in\u00a0Escherichia coli\u00a0genome during adaptation to the murine intestine is\u00a0optimized for the host diet\u201d, mSystems,<\/em>\u00a02024, 9<\/strong>(2):e0112323. (PubMed<\/a>)<\/span><\/li>\n
  10. Sato\u00a0<\/span>R<\/span>,<\/span>\u00a0<\/span>Saito<\/span>\u00a0<\/span>R<\/span>,<\/span>\u00a0<\/span>Takeda<\/span>\u00a0<\/span>T<\/span>,<\/span>\u00a0<\/span>Sasaki<\/span>\u00a0<\/span>N<\/span>,<\/span>\u00a0<\/span>Yuzawa<\/span>\u00a0<\/span>S<\/span>,<\/span>\u00a0<\/span>Saito<\/span>\u00a0<\/span>N<\/span>,<\/span>\u00a0Arakawa\u00a0K<\/strong><\/span>, \u201cGenome sequences of three\u00a0Streptomyces\u00a0isolated from the soil\u00a0of soybean field in Tsuruoka, Japan\u201d, Microbiol Resour Announc<\/em>, 2024, 0:e01059-24. (Publisher<\/a>)<\/span><\/li>\n
  11. Bino T, Goto Y, Maryu G, Arakawa K<\/strong><\/span>, Aoki K,\u00a0\u201cPossible roles of CAHS proteins form Tardigrade in osmotic stress\u00a0tolerance in mammalian cells\u201d, Cell Struct Funct<\/em>, 2024, 49<\/strong>(2):123-133<\/span>. (PubMed<\/a>)\u00a0
    <\/strong><\/span><\/li>\n
  12. \n
  13. Ikeda\u00a0H,\u00a0Oshibuchi\u00a0K,\u00a0Yang\u00a0J,\u00a0Fukuda\u00a0S,\u00a0Arakawa\u00a0K<\/strong><\/span>, \u201cComplete genome sequence of\u00a0Bulleidia\u00a0sp. 10714-15 isolated from human\u00a0colon cancer patients\u201d, Microbiol Resour Announc<\/em>, 2024, 0:e00937-24.\u00a0(Publisher<\/a>)<\/span><\/li>\n
  14. Yamamoto\u00a0PK,\u00a0Fujimoto\u00a0Y,\u00a0Warashina\u00a0T,\u00a0Arakawa\u00a0K<\/strong><\/span>, \u201cComplete genome sequences of two\u00a0Paenibacillus\u00a0isolated from pegmatite in Fukushima, Japan\u201d, Microbiol\u00a0Resour Announc<\/em>, 2024,\u00a00:e00938-24.\u00a0(Publisher<\/a>)<\/span><\/li>\n
  15. Ito\u00a0<\/span>L<\/span>,<\/span>\u00a0<\/span>Masui<\/span>\u00a0<\/span>M<\/span>,<\/span>\u00a0<\/span>Galipon<\/span>\u00a0<\/span>J<\/span>,<\/span>\u00a0<\/span>Arakawa\u00a0K<\/strong><\/span>, \u201c<\/span>Complete genome sequence of polylactic acid degrading<\/span>\u00a0<\/span>Rhodopseudomonas<\/span>\u00a0<\/span>palustris\u00a0strain R1 isolated from rice field soil\u201d,\u00a0Microbiology Resource Announcements<\/em>, 2024,0:e00814-24. (Publisher<\/a>)<\/span><\/li>\n
  16. \n
  17. Ichimura R, Tanaka K, Nakato G,\u00a0Fukuda S, Arakawa K<\/strong><\/span>,\u00a0\u201cComplete genome sequence of\u00a0Mediterraneibacter gnavus\u00a0strain RI1, isolated from human\u00a0feces\u201d,\u00a0Microbiology Resource Announcements<\/em>, 2024,0:e00863-24. (Publisher<\/a>)<\/li>\n
  18. Ishikawa S<\/strong><\/span>, Tanaka S<\/span><\/strong>, Arakawa K<\/strong><\/span>, \u201cSearch for putative gene regulatory motifs in CAHS3, linked to anhydrobiosis in a tardigrade\u00a0Ramazzottius varieornatus, in vivo and in silico\u201d,\u00a0Genes to Cells<\/em>, 2024, 29<\/span><\/strong>(12<\/span>),\u00a01144<\/span>\u20131153<\/span>. (Publisher<\/a>)<\/span><\/li>\n
  19. Craig H.C, Malay A.D, Hayashi F, Mori\u00a0M, Arakawa K<\/strong><\/span>, Numata \u00a0K, \u201cPosttranslational modifications in spider silk influence conformation\u00a0and dimerization dynamics\u201d, MRS Bulletin<\/em>,\u00a02024. (Publisher<\/a>)<\/span><\/li>\n
  20. Sugiura K, Yoshida Y<\/strong><\/span>, Hayashi K, Arakawa K<\/span><\/strong>, Kunieda T, Matsumoto M, \u201cSexual dimorphism in the tardigrade\u00a0Paramacrobiotus\u00a0metropolitanus\u00a0transcriptome\u201d,\u00a0Zoological Letters<\/em>, 2024,10, 11.\u00a0(Publisher<\/a>)<\/li>\n
  21. Yoshida Y<\/strong><\/span>, Hirayama A, Arakawa K<\/strong><\/span>, \u201cTranscriptome analysis of the tardigrade Hypsibius exemplaris exposed to the DNA-damaging agent\u00a0bleomycin\u201d, Proc Jpn Acad Ser B Phys Biol Sci<\/em>, 2024,100<\/strong>(7):414-428.\u00a0(PubMed<\/a>)\u00a0<\/span><\/li>\n
  22. Miyake A, Harada S, Sugiyama D, Matsumoto M, Hirata A, Miyagawa N, Toki, R, Edagawa S, Kuwabara K, OkamuraT, Sato A,\u00a0Amano\u00a0K,\u00a0Hirayama\u00a0A,\u00a0Sugimoto\u00a0M,\u00a0Soga\u00a0T, Tomita\u00a0M,\u00a0Arakawa\u00a0K<\/strong><\/span>,\u00a0Takebayashi\u00a0T, Iida\u00a0M, \u201cReliability of Time-Series Plasma Metabolome Data over 6 Years in a Large-Scale Cohort Study\u201d, Metabolites<\/em>, 2024, 14<\/strong>(1):77. (Publisher<\/a>)<\/span><\/li>\n
  23. Kato S<\/span>,<\/span>\u00a0<\/span>Yuzawa S<\/span>,<\/span>\u00a0Takeda T,\u00a0Arakawa\u00a0K<\/strong><\/span>, \u201cComplete genome sequence of<\/span>\u00a0Kitasatospora aureofaciens\u00a0T\u00fc117<\/i>\u201d,\u00a0<\/span>Microbiology Resource Announcements<\/em>, 2024, 13<\/b>(2):e01014-23.<\/span>\u00a0<\/span>(Publisher<\/a>)<\/span><\/li>\n
  24. Michalczyk \u0141, \u00a0Gross\u00a0V, Arakawa K<\/strong><\/span>,\u00a0\u201cProgress in research on water bears presented at the 15th<\/span>\u00a0International Symposium on Tardigrada (Krak\u00f3w, 22nd<\/span>\u201326th<\/span>\u00a0of August 2022)\u201d, Zoological Journal of the Linnean Society<\/em>, 2024,\u00a0200<\/strong>(1):1\u201311.\u00a0(Publisher<\/a>)<\/li>\n
  25. Fleming J<\/strong><\/span>, Pisani D, Arakawa K<\/strong><\/span>, \u201cThe evolution of temperature and desiccation-related protein families in Tardigrada reveals the\u00a0complex acquisition of extremotolerance\u201d,\u00a0Genome Biology and Evolution<\/em>, 2023, 16<\/strong>(1):evad217.(PubMed<\/a>)<\/span><\/li>\n
  26. Naruki\u00a0M,\u00a0Watanabe\u00a0A,\u00a0Warashina T, Morita T, Arakawa K<\/strong><\/span>, \u201cComplete genome sequence of\u00a0Limnobacter thiooxidans\u00a0CS-K2T<\/span>, isolated from freshwater lake sediments in\u00a0Bavaria, Germany\u201d,\u00a0Microbiology Resource Announcements<\/em>, 2023,14<\/strong>:e00992-23. (Publisher<\/a>)<\/li>\n
  27. Oshibuchi K,\u00a0Yang\u00a0J,\u00a0Obana\u00a0N,\u00a0Fukuda S,\u00a0Arakawa K<\/strong><\/span>,\u00a0\u201cComplete genome sequence of\u00a0Solobacterium moorei\u00a0JCM 10645T isolated from a human stool sample\u201d, Microbiology Resource Announcements<\/em>, 2023,14<\/strong>:e00965-23.\u00a0(Publisher<\/a>)<\/li>\n
  28. Kawashima T,<\/span>\u00a0Watanabe Y<\/strong>,<\/span>\u00a0<\/strong>Arakawa K<\/strong>,<\/span> \u201cComplete genome sequence of\u00a0Actinoplanes sichuanensis\u00a0strain 03-723T\u201d,\u00a0Microbiology Resource Announcements<\/em>, 2023, 14<\/strong>:e00662-23. (Publisher<\/a>)<\/li>\n
  29. Tanaka S<\/strong><\/span>, Arakawa K<\/strong><\/span>, \u201cReply to Tanaka and Kunieda: Control protein GFP also\u00a0shows a mesh-like structure in desiccating tardigrade\u00a0cells\u201d, PNAS<\/em>, 2023, 120<\/strong>(48):e2316451120. (PubMed<\/a>)<\/span><\/li>\n
  30. \n
  31. Sato\u00a0A,\u00a0Arakawa K<\/strong><\/span>,\u00a0Kakui\u00a0K, \u201cTwo new species in Leptocheliidae (Crustacea: Peracarida: Tanaidacea)\u00a0from Japan, with notes on their phylogenetic position and aspects of\u00a0morphology\u201d,\u00a0Zoologischer Anzeiger<\/em>, 2023,\u00a0306<\/strong>:51-68.\u00a0(Publisher<\/a>)<\/li>\n
  32. Arakawa K<\/strong><\/span>, Hirose T,\u00a0Inada T,\u00a0Ito T, Kai T,\u00a0Oyama M,\u00a0Tomar Y,\u00a0Yoda T,\u00a0Nakagawa S, \u201cNondomain biopolymers: Flexible molecular strategies to acquire biological functions\u201d,\u00a0Genes to Cells<\/em>, 2023, 28<\/strong>(8):539<\/span>-552<\/span>. (Publisher<\/a>)<\/li>\n
  33. Nakamura H<\/strong><\/span>, Kono N<\/strong><\/span>, Mori M, Masunaga H, Numata K, Arakawa K<\/span><\/strong>, \u201cComposition of Minor Ampullate\u00a0Silk Makes Its Properties\u00a0Different from Those of Major\u00a0Ampullate Silk\u201d, Biomacromolecules<\/em>, 2023,<\/span> 24<\/strong>(5):2042-2051. (PubMed<\/a>)<\/span><\/li>\n
  34. Watanabe Y<\/strong>,<\/span>\u00a0Arakawa K<\/span><\/strong>, \u201cMolecular mechanisms of the high performance of spider silks revealed through multi-omics analysis\u201d,\u00a0Biophysics and Physicobiology<\/em>,\u00a02023,\u00a0e200014. (Publisher<\/a>)<\/li>\n
  35. Arakawa K<\/span><\/strong><\/span>, \u201cA Nanopore Sequencing Course for\u00a0Graduate School Curriculum\u201d, Methods Mol. Biol,<\/em>\u00a02023, 2632<\/strong>:113-127.\u00a0(PubMed<\/a>)<\/li>\n
  36. Takasuka K<\/span><\/strong><\/span>, <\/strong>Arakawa K<\/span><\/strong><\/span>,\u00a0\u201cThe Method of Eliminating the\u00a0Wolbachia EndosymbiontGenomes from Insect Samples\u00a0Prior to a Long-Read Sequencing\u201d,\u00a0Methods Mol. Biol<\/em>, 2023, 2632<\/strong>:101-112. (PubMed<\/a>)<\/li>\n
  37. Arakawa K<\/span><\/strong><\/span>,\u00a0\u201cUltralow-Input Genome Library\u00a0Preparation for Nanopore\u00a0Sequencing with Droplet MDA\u201d, Methods Mol. Biol,<\/em>\u00a02023, 2632<\/strong>:91-100. (PubMed<\/a>)<\/li>\n
  38. Tanaka S<\/strong><\/span>, Aoki K, Arakawa K<\/strong><\/span>,<\/span>\u00a0\u201cIn vivo expression vector derived from anhydrobiotic tardigrade genome enables live imaging in Eutardigrada\u201d, PNAS<\/span>,\u00a02023,\u00a0120<\/strong>(5): e2216739120.\u00a0(Publisher<\/a>)<\/li>\n
  39. Arakawa K<\/strong><\/span>,\u00a0<\/span>Kono N<\/span>,\u00a0<\/span>Malay A.D,\u00a0<\/span>Tateishi A,<\/span>\u00a0<\/span>Ifuku N,\u00a0<\/span>Masunaga<\/span>\u00a0H,\u00a0<\/span>Sato R,\u00a0<\/span>Tsuchiya\u00a0K,\u00a0Ohtoshi R,\u00a0Pedrazzoli D,\u00a0<\/span>Shinohara A,\u00a0<\/span>Ito Y,\u00a0<\/span>Nakamura H<\/span><\/strong>,\u00a0<\/span>Tanikawa<\/span>\u00a0 A,\u00a0<\/span>Suzuki<\/span>\u00a0Y,\u00a0Ichikawa T,\u00a0Fujita S,\u00a0Fujiwara\u00a0<\/span>M,\u00a0<\/span>Tomita\u00a0<\/span>M,\u00a0<\/span>Blamires S.J,<\/span>\u00a0<\/span>Chuah J-A,\u00a0<\/span>Craig\u00a0<\/span>H,\u00a0<\/span>Foong\u00a0<\/span>C.P,\u00a0<\/span>Greco<\/span>\u00a0<\/span>G,\u00a0<\/span>Guan\u00a0<\/span>J,\u00a0<\/span>Holland<\/span>\u00a0<\/span>C,\u00a0<\/span>Kaplan\u00a0D.L,\u00a0Sudesh\u00a0<\/span>K,<\/span>\u00a0<\/span>Mandal\u00a0<\/span>B.<\/span>B,\u00a0<\/span>Norma-Rashid.Y, Oktaviani N.A,<\/span>\u00a0<\/span>Preda R.C,\u00a0Pugno N.M,\u00a0Rajkhowa R,\u00a0<\/span>Wang X,\u00a0<\/span>Yazawa\u00a0<\/span>K,\u00a0<\/span>Zheng\u00a0Z,\u00a0Numata K<\/span>, \u201c<\/span>1000 spider silkomes: Linking sequences to silk\u00a0physical properties\u201d<\/span>,\u00a0<\/span>Science Advances<\/em>, 2022, 8<\/strong><\/span>(41):<\/span>eabo604<\/span>. (<\/span>Publisher<\/span><\/a>)<\/span><\/li>\n
  40. Huang M, Miura MC,\u00a0Inoue R,\u00a0Sato A,\u00a0Kamezaki K,\u00a0Tomita M,\u00a0Mori M,\u00a0Arakawa K<\/strong><\/span>,\u00a0Kanai A,\u00a0\u201cDataset for proteomic analysis of\u00a0Escherichia coli\u00a0before and after\u00a0severe heat shock stress\u201d,\u00a0Journal of Proteome Data\u00a0and Methods<\/i>, 2022, 4<\/strong>:1.\u00a0(Publisher<\/a>)<\/li>\n
  41. \n
  42. Yoshida Y, Tanaka S<\/span><\/strong><\/span>, <\/strong>\u201cDeciphering the Biological Enigma\u2014Genomic Evolution Underlying\u00a0Anhydrobiosis in the Phylum Tardigrada and the Chironomid\u00a0Polypedilum\u00a0vanderplanki<\/i>\u201d, Insects<\/i>, \u00a02022,\u00a013<\/strong>(6):557. (Publisher<\/a>)<\/li>\n
  43. Ishikawa S<\/strong><\/span>,\u00a0Huang M,\u00a0Tomita A,\u00a0Kurihara Y<\/strong><\/span>,\u00a0Watanab R<\/span><\/strong>,\u00a0Iwai\u00a0H<\/span><\/strong>,\u00a0Arakawa\u00a0K<\/span><\/strong>, \u201cComplete Genome Sequences of Four Bacteria Isolated from the Gut of a Spiny Ant (Polyrhachis lamellidens<\/em>)\u201d,\u00a0Microbiology\u00a0Resource Announcements<\/em>, 2022,\u00a0e00333-22. (Publisher<\/a>)<\/li>\n
  44. Takeda T<\/strong><\/span>, Fukumitsu N, Yuzawa S, Arakawa K<\/strong><\/span>, \u201cComplete Genome Sequence of Streptomyces albus<\/em> Strain G153\u201d,\u00a0Microbiology Resource Announcements<\/em>, 2022, e00332-22. (Publisher<\/a>)<\/li>\n
  45. Yoshida Y<\/strong><\/span>, Satoh T, Ota C, Tanaka S, Horikawa D.D<\/strong><\/span>, Tomita M, Kato Koichi, Arakawa K<\/strong><\/span>, \u201cTime-series transcriptomic screening of factors contributing to the cross-tolerance to UV radiation and anhydrobiosis in tardigrades\u201d,\u00a0BMC\u00a0Genomics<\/em>, 2022,\u00a023,\u00a0405. (Publisher<\/a>)<\/li>\n
  46. Kurihara Y<\/span><\/strong>,\u00a0Iwai H<\/strong><\/span>,\u00a0Kono N<\/strong><\/span>, Tomita M,\u00a0Arakawa K<\/strong><\/span>,\u00a0\u201cInitial parasitic behaviour of the temporary social parasitic ant\u00a0Polyrhachis lamellidens\u00a0can be induced by host-like cuticles in\u00a0laboratory environment\u201d,\u00a0Biol Open<\/em>, 2022,\u00a011<\/strong>(3): bio058956.\u00a0(Publisher<\/a>)<\/span><\/li>\n
  47. \n
    Miyazawa K, Itoh S.G, Y<\/strong><\/span><\/span>oshida Y<\/strong><\/span>, Arakawa K<\/strong><\/span>,\u00a0<\/span>Okumura H<\/span>,<\/span>\u00a0\u201cTardigrade Secretory-Abundant Heat-Soluble Protein Varies Entrance Propensity Depending on the Amino-Acid\u00a0Sequence\u201d, J. Phys. Chem. B<\/em>, 2022, 126<\/b><\/span>\u00a0<\/span>(12): 2361-2368<\/span>. (Publisher<\/a>)<\/div>\n<\/li>\n
  48. Arakawa K<\/strong><\/span>,<\/strong>\u00a0\u201cExamples of Extreme Survival: Tardigrade Genomics and Molecular Anhydrobiology\u201d, Annual Review of Animal Biosciences<\/em>, 2022, 10<\/strong>: 17-33. (Publisher<\/a>)<\/li>\n
  49. Kono N<\/u><\/strong>, Ohtoshi R, Malay A.D, Mori M,\u00a0Masunaga H, <\/span>Yoshida Y<\/u><\/strong>, <\/span>Nakamura H<\/u><\/strong>,<\/span>Numata K,<\/span>\u00a0\u00a0<\/span>Arakawa K<\/u><\/strong>\u00a0<\/span>\u201c<\/span>Darwin’s bark spider shares a spidroin\u00a0repertoire with\u00a0Caerostris extrusa\u00a0but\u00a0achieves extraordinary silk toughness\u00a0through gene expression\u201d, Open Biol<\/em>, 2021<\/span>, 11<\/b>(12): 210242.\u00a0(Publisher<\/a>)<\/span><\/li>\n
  50. Kakui K,\u00a0Fleming J.F<\/strong><\/span>, Mori M, Fujiwara Y,\u00a0Arakawa K\u00a0<\/span><\/strong>\u201cComprehensive transcriptome sequencing of Tanaidacea with proteomic evidences for\u00a0their silk\u201d, Genome Biology and Evolution<\/em>, 2021, <\/span>13<\/b>(12):e281<\/span>.\u00a0(Publisher<\/a>)<\/li>\n
  51. \n
  52. \n
  53. Kono N<\/strong><\/span>,\u00a0Nakamura H<\/span><\/strong>,\u00a0Ohtoshi R,\u00a0Arakawa K<\/strong><\/span>, \u201cTranscriptomic data during development of a two-spotted cricket\u00a0Gryllus bimaculatus\u201d,\u00a0Data in Brief<\/em>, 2021, 38<\/strong>:<\/span>107388<\/span>.\u00a0(Publisher<\/a>)<\/li>\n
  54. Iwai H<\/b><\/span>, <\/span>Kurihara Y<\/b><\/span>, <\/span>Kono N<\/b><\/span>, Tomita M, <\/span>Arakawa K<\/b><\/span>, \u201c<\/span>The evidence of temporary social parasitism by<\/span>\u00a0<\/span>Polyrhachis lamellidens<\/span>\u00a0<\/span>(Hymenoptera,<\/span>\u00a0<\/span>Formicidae) in a<\/span>\u00a0<\/span>Camponotus obscuripes<\/span>\u00a0colony (Hymenoptera,<\/span>\u00a0<\/span>Formicidae)\u201d, <\/span>Insectes Sociaux<\/i>, 2021,<\/span>\u00a068<\/strong>:375-382\u00a0<\/strong><\/span>.<\/span>\u00a0(<\/span>Publisher<\/span><\/a>)<\/span><\/li>\n
  55. Miyazawa K, Itoh S.G, Watanabe H, Uchihashi T, Yanaka S,\u00a0Yagi-Utsumi M, Kato K, Arakawa K<\/strong><\/span>, Okumura H,\u00a0\u201cTardigrade Secretory-Abundant Heat-Soluble Protein Has a Flexible \u03b2-Barrel Structure in Solution\u00a0and Keeps This Structure in Dehydration\u201d,\u00a0J. Phys. Chem. B<\/i>, 2021, 125<\/b><\/span>\u00a0(32): 9145-9154<\/span>. (Publisher<\/a>)<\/li>\n
  56. Kono N<\/strong><\/span>,\u00a0Nakamura H<\/strong><\/span>,\u00a0Mori M,\u00a0Yoshida Y<\/strong><\/span>,\u00a0Ohtoshi R,\u00a0Malay A.D,\u00a0Pedrazzoli Moran DA,\u00a0Tomita M,\u00a0Numata K,\u00a0\u00a0<\/span>Arakawa K<\/strong><\/span>, \u201cMulticomponent nature underlies the extraordinary mechanical properties of spider dragline silk\u201d,\u00a0PNAS<\/i>, 2021, 118<\/strong>(31):\u00a0e2107065118. (Publisher<\/a>)<\/li>\n
  57. Watanabe\u00a0Y<\/strong><\/span>,\u00a0Takeuchi\u00a0N,\u00a0Yang\u00a0J, Obana\u00a0N,\u00a0Morinaga\u00a0K,\u00a0Kusada\u00a0H,\u00a0Tamaki\u00a0H,\u00a0Fukuda\u00a0S,\u00a0Arakawa K<\/strong><\/span>, \u201cComplete Genome Sequence of\u00a0Atopobiaceae\u00a0Bacterium Strain P1, Isolated from Mouse Feces\u201d,\u00a0Microbiology Resource Announcements,\u00a0<\/i>2021,\u00a010<\/strong>(28):e00627-21<\/span>. (Publisher<\/a>)<\/li>\n
  58. \n
  59. Fleming J.F<\/strong><\/span>,\u00a0Pisani D,\u00a0Arakawa K<\/strong><\/span>, “New Tardigrade Opsins and Differential\u00a0<\/span>Expression Analyses shows ontogenic variation\u00a0in light perception\u201d,\u00a0Genome Biology and Evolution<\/em>, 2021, 13<\/strong>(8):evab164.(PubMed<\/a>)<\/span><\/li>\n
  60. \n
  61. Yoshida Y<\/strong><\/span>, Horikawa DD<\/strong><\/span>,\u00a0Sakashita T, Yokota Y,\u00a0Kobayashi Y, Tomita M,\u00a0Arakawa K<\/span><\/strong>, “RNA sequencing data for gamma radiation response in the extremotolerant tardigrade\u00a0Ramazzottius varieornatus\u201d, Data in Brief<\/em>, 2021,\u00a036<\/strong>:107111. (Publisher<\/a>)<\/span><\/li>\n
  62. Fujiwara M<\/strong><\/span>,<\/span>\u00a0<\/strong>Kono N<\/strong><\/span>, Hirayama A, Malay A.D,<\/span>\u00a0<\/span>Nakamura H<\/strong><\/span>, Ohtoshi R, Numata K, Tomita M,<\/span>\u00a0<\/span>Arakawa K<\/strong><\/span>, “Xanthurenic Acid Is the Main Pigment of\u00a0<\/span>Trichonephila clavata<\/span>\u00a0<\/span>Gold<\/span>\u00a0<\/span>Dragline Silk\u201d,\u00a0<\/span>Biomolecules<\/em>,\u00a02021,<\/span>\u00a0<\/span>11<\/strong>(4):563. (<\/span>Publisher<\/a>)<\/span><\/li>\n
  63. \n
  64. Berger C.A, Brewer M.S,\u00a0Kono\u00a0N<\/strong><\/span>,\u00a0Nakamura\u00a0H<\/strong><\/span>,\u00a0Arakawa\u00a0K<\/strong><\/span>,\u00a0Kennedy S.R,\u00a0Wood H.M,\u00a0Adams S.A,\u00a0Gillespie R.G, “Shifts in morphology, gene expression, and\u00a0selection underlie web loss in Hawaiian\u00a0Tetragnatha spiders\u201d, BMC Ecology and Evolution<\/em>, 2021,\u00a021<\/strong>(1):48. (PubMed<\/a>)<\/span><\/li>\n
  65. Arakawa K<\/span><\/strong>,\u00a0<\/span>Mori M, <\/span>Kono N<\/strong><\/span>,\u00a0<\/span>Suzuki T,\u00a0Gotoh T,\u00a0Shimano\u00a0S,\u00a0“Proteomic evidence for the silk fibroin genes of spider mites (order Trombidiformes: Family\u00a0Tetranychidae)\u201d, Journal of Proteomics<\/em>, 2021, 239:<\/span>104195<\/span>. (Publisher<\/a>)<\/span><\/span><\/li>\n
  66. Nishimura\u00a0K,\u00a0Ikarashi\u00a0M,\u00a0Yasuda Y, Sato M,\u00a0Guerrero\u00a0MC, Galipon\u00a0J,\u00a0Arakawa K<\/strong><\/span>,\u00a0“<\/span>Complete Genome Sequence of\u00a0Sphingomonas paucimobilis Strain\u00a0Kira, Isolated from Human\u00a0Neuroblastoma SH-SY5Y Cell Cultures\u00a0Supplemented with Retinoic Acid\u201d,\u00a0Microbiology Resource Announcements<\/i>,\u00a02021,\u00a010<\/strong>(6):e01156-20.\u00a0(PubMed<\/a>)<\/span><\/li>\n
  67. Arakawa K<\/strong><\/span>, Numata K, “<\/span>Reconsidering the \u201cglass transition\u201d hypothesis of intrinsically unstructured CAHS\u00a0proteins in desiccation tolerance of tardigrades\u201d<\/span>,\u00a0Molecular Cell<\/em>, 2021,\u00a081<\/strong>(3):409-410.\u00a0(Publisher<\/a>)<\/span><\/span><\/li>\n
  68. Fleming J.F<\/strong><\/span>, Arakawa\u00a0K<\/strong>,<\/span>\u00a0“<\/span>Systematics of tardigrada: A reanalysis of tardigrade taxonomy with specific reference to Guil et al.\u00a0(2019)\u201d,\u00a0Zoologica Scripta<\/em>, 2021, 50<\/b>(3): 376-382. (Publisher<\/a>)<\/span><\/li>\n
  69. Stec D, Krzywa\u0144ski \u0141,\u00a0Arakawa K<\/strong><\/span>, Michalczyk \u0141, “A new redescription of Richtersius coronifer, supported by\u00a0transcriptome, provides resources for describing concealed species diversity within the monotypic genus Richtersius\u00a0(Eutardigrada)”, Zoological Lett<\/em>, 2020, 6:2. (PubMed<\/a>)<\/span><\/span><\/li>\n
  70. Malay A.D, Suzuki\u00a0T,\u00a0Katashima\u00a0T,\u00a0Kono\u00a0N<\/span><\/strong>,\u00a0Arakawa\u00a0K<\/strong><\/span>, Numata\u00a0K, “<\/span>Spider silk self-assembly via modular liquid-liquid phase separation and nanofibrillation\u201d<\/span>,\u00a0Science Advances<\/em>, 2020,\u00a06<\/strong>(45):eabb6030.\u00a0(Publisher<\/a>)<\/span><\/li>\n
  71. Kono N<\/strong><\/span>,\u00a0Nakamura H<\/strong><\/span><\/span>, Mori M, Tomita M,\u00a0<\/span>Arakawa K<\/strong><\/span>,\u00a0“<\/span><\/span>Spidroin profiling of cribellate spiders provides insight into the<\/span>\u00a0<\/span>evolution of spider prey capture strategies\u201d<\/span>,\u00a0<\/span>Scientific Reports<\/em>,\u00a0<\/span>15721(2020)<\/span>.\u00a0<\/span>(<\/span>Publisher<\/a>)<\/span><\/span><\/li>\n
  72. \n
  73. Sakata R. C, Ishiguro S, Mori H, Tanaka M, Tatsuno K, Ueda H, Yamamoto S, Seki M, Masuyama N, Nishida K, Nishimasu H, Arakawa K<\/strong><\/span>, Kondo A, Nureki O, Tomita M, Aburatani H, Yachie N,\u00a0“<\/span>Base editors for simultaneous introduction of C-to-T and A-to-G mutations\u201d<\/span>, <\/span><\/span>Nature Biotechnology<\/em>, 2020,\u00a038<\/strong>(7):865-869<\/span>.\u00a0<\/span>(Publisher<\/a>)<\/span><\/li>\n
  74. \n
  75. Kurihara Y,\u00a0Kawai S,\u00a0Ayano Sakai,\u00a0Galipon J, Arakawa K<\/b><\/u>, “Complete Genome Sequence of\u00a0Halomonas meridiana\u00a0Strain Eplume2,\u00a0Isolated from a Hydrothermal Plume in\u00a0the Northeast Pacific Ocean”, <\/span>Microbiology Resource Announcements<\/i>, 2020,\u00a09<\/strong>(20):e00330-20.\u00a0(Publisher<\/a>)<\/span><\/li>\n
  76. Seo K, Tanaka K, Fukuda S, Arakawa K<\/span><\/strong>, “Complete Genome Sequences of Two\u00a0Cutibacterium\u00a0acnes\u00a0Strains Isolated from an Orthopedic Surgical\u00a0Site”,\u00a0<\/span>Microbiology Resource Announcements<\/em>, 2020,\u00a09<\/strong>(17):e00290-20.\u00a0(Publisher<\/a>)<\/span><\/span><\/span>
    <\/span><\/li>\n
  77. Sugiura K, Arakawa K<\/strong><\/span>, Matsumoto M, “Distribution of\u00a0Macrobiotus shonaicus\u00a0Stec, Arakawa & Michalczyk, 2018\u00a0(Tardigrada: Eutardigrada: Macrobiotidae) in Japan”ZooTaxa,\u00a0<\/em>2020,\u00a04767<\/strong>(1):56-70.\u00a0(Publisher<\/a>)<\/span><\/span><\/span><\/span><\/li>\n
  78. Takahashi Y,\u00a0Takahashi H,\u00a0Galipon J,\u00a0Arakawa K<\/strong><\/span>,\u00a0“Complete Genome Sequence of\u00a0Halomonas meridiana\u00a0Strain Slthf1,\u00a0Isolated from a Deep-Sea Thermal Vent”,\u00a0Microbiology Resource Announcements,\u00a0<\/em>2020,\u00a0<\/span>9<\/strong><\/span>(16):e00292-20. (Publisher<\/a>)<\/span><\/span><\/span><\/span><\/li>\n
  79. Murai Y<\/span>,<\/span>\u00a0Masuda T<\/span>,<\/span>Onuma Y<\/span>,<\/span>Yamamoto D.E<\/span>,<\/span>Takeuchi N<\/span>,<\/span>Mori H<\/span>,<\/span>Masuyama N<\/span>,<\/span>Ishiguro S<\/span>,<\/span>\u00a0<\/span>Yachie N<\/span>,\u00a0<\/span>Arakawa K<\/strong><\/span>, “Complete Genome Sequence of\u00a0Bacillus\u00a0sp. Strain\u00a0KH172YL63, Isolated from Deep-Sea Sediment”,\u00a0Microbiology Resource Announcements,\u00a0<\/em>2020,\u00a0<\/span>9<\/strong><\/span>(16):<\/span>e00291-20. (Publisher<\/a>)<\/span><\/span><\/li>\n
  80. Takeyama N,Huang M,Sato K, Galipon J,\u00a0Arakawa K<\/u>,<\/strong> “Complete Genome Sequence of\u00a0Halomonas hydrothermalis<\/em>\u00a0Strain Slthf2, a Halophilic Bacterium Isolated from a Deep-Sea Hydrothermal-Vent Environment“,\u00a0<\/span>Microbiology Resource Announcements,<\/em><\/span>\u00a02020,\u00a0<\/span>9<\/strong>\u00a0<\/span>(15):<\/span>e00294-20. (Publisher<\/a>)<\/span><\/span>\u00a0<\/span><\/li>\n
  81. \n

    Arakawa K<\/span>,<\/strong>“Simultaneous Metabarcoding of Eukaryotes and Prokaryotes to\u00a0Elucidate the Community Structures within Tardigrade\u00a0Microhabitats”,\u00a0Diversity<\/em>, 2020, 12<\/strong>(3):110. (Publisher<\/a>)<\/span><\/span><\/p>\n<\/li>\n

  82. \n

    Mapalo MA, Arakawa K<\/strong><\/span>, Baker CM, Persson DK, Mirano-Bascos D, Giribet G<\/span>,\u00a0<\/span>“The Unique Antimicrobial Recognition and Signaling Pathways in Tardigrades with a Comparison Across Ecdysozoa”, G3(Bethesda)<\/em>, 2020 Jan 22<\/span><\/span>, 10<\/strong>(3):1137-1148. (PubMed<\/a>)<\/span><\/span><\/p>\n<\/li>\n

  83. \n

    Yoshida Y<\/strong><\/span>, Sugiura K, Tomita M, Matsumoto M, Arakawa K<\/strong><\/span>, “Comparison of the transcriptomes of two tardigrades with different hatching coordination”,\u00a0BMC Development Biology,\u00a0<\/span><\/em>\u00a02019, 19<\/strong>(1):24. (Publisher<\/a>)\u00a0<\/span><\/p>\n<\/li>\n

  84. \n

    Kondo K<\/span><\/strong>, Mori M, Tomita M, Arakawa K<\/span><\/strong>, “<\/span>AMPK activity is required for the induction of anhydrobiosis in a tardigrade\u00a0<\/span>Hypsibius exemplaris<\/i>, and its potential upregulator is PP2A”, Genes to Cells, <\/i>2019, 24<\/strong>(12):768-780. (Publisher<\/a>)<\/span><\/p>\n<\/li>\n

  85. \n

    Craig RJ, B\u00f6ndel KB, Arakawa K<\/span><\/strong>, Nakada T, Ito T, Bell G, Colegrave N, Keightley PD, Ness RB, “Patterns of population structure and complex haplotype sharing among field isolates of the green alga Chlamydomonas reinhardtii”, Molecular Ecology<\/em>, 2019, 28<\/strong>(17):3977-3993. (Publisher<\/a>)<\/span><\/p>\n<\/li>\n

  86. \n

    Yoshida Y<\/span><\/strong>, Novel RW, Arakawa K<\/span><\/strong>, Baxter M, “Horizontal Gene Transfer in Metazoa: Examples and Methods”, Horizontal Gene Transfer<\/em>, 2019, 203-226.(Publisher<\/a>)<\/span><\/p>\n<\/li>\n

  87. \n

    <\/span>Masuda T<\/span><\/strong>, Kono N<\/span><\/strong>, Tomita M, Arakawa K<\/span><\/strong>, “Strand-specific Single-stranded DNA Sequencing (4S-seq) of\u00a0E. coli<\/em>genomes”,\u00a0Bio-protocol, 2019,<\/em>\u00a09<\/strong>(15): e3329. (Publisher<\/a>)<\/span><\/p>\n<\/li>\n

  88. \n

    Kono N<\/span><\/strong>, Nakamura H, Ohtoshi R, Pedrazzoli Moran DA, Shinohara A, Yoshida Y<\/span><\/strong>, Fujiwara M, Mori M, Tomita M, <\/span>Arakawa K<\/span><\/span><\/strong>, \u201cOrb-weaving spider Araneus ventricosus<\/em> genome elucidates the spidroin gene catalogue\u201d, Scientific Reports 9<\/em>, 8380(2019). (Publisher<\/a>)<\/span><\/p>\n<\/li>\n

  89. \n

    Nagata S, Ii KM<\/strong><\/span>, Tsukimi T, Miura MC, Galipon J,\u00a0<\/span>Arakawa K<\/span><\/span><\/strong>, “Complete genome sequence of Halomonas olivaria, a moderately halophilic bacterium isolated from olive processing effluents, obtained by nanopore sequencing”, Microbiol Resour Announc<\/em>, 2019, 8<\/strong>:e00144-19. (Publisher<\/a>)<\/span><\/p>\n<\/li>\n

  90. \n

    <\/span><\/span>Saito M, Nishigata A, Galipon J,\u00a0<\/strong><\/span>Arakawa K<\/span><\/span><\/strong>, “Complete Genome Sequence of Halomonas sulfidaeris Strain Esulfide1 Isolated from a Metal Sulfide Rock at a Depth of 2,200 Meters, Obtained Using Nanopore Sequencing”, Microbiol Resour Announc<\/em>, 2019, 8<\/strong>(23):e00327-19. (Publisher<\/a>)<\/span><\/p>\n<\/li>\n

  91. Kono N<\/span><\/strong>, Arakawa K<\/span><\/strong>, “Nanopore sequencing: Review of potential applications in functional genomics”,\u00a0Develop Growth Differ,<\/i>\u00a02019; 00: 1\u2013 11. (Publisher<\/a>)<\/span><\/li>\n
  92. Kono N<\/span><\/strong>, Nakamura H, Ohtoshi R, Tomita M, Numata K, Arakawa K<\/span><\/strong>, “The bagworm genome reveals a unique fibroin gene that provides high tensile strength”,Communications Biology<\/i>\u00a02<\/b>, Article\u00a0number:\u00a0148 (2019). (Publisher<\/a>)<\/span><\/li>\n
  93. Evans-Yamamoto D, Takeuchi N, Masuda T<\/span><\/strong>, Murai Y<\/span><\/strong>, Onuma Y, Mori H, Masuyama N, Ishiguro S, Yachie N, Arakawa K<\/span><\/strong>, ” Complete genome sequence of\u00a0<\/span>Psychrobacter<\/em>\u00a0sp. strain KH172YL61, isolated from deep-sea sediments in the Nankai Trough, Japan”,\u00a0\u00a0Microbiol Resour Announc, 2019,<\/em> 8<\/strong>:e00326-19. (Publisher<\/a>)<\/span><\/li>\n
  94. \u00a0<\/a>Sugiura K,<\/span>\u00a0<\/span>Minato H,<\/span>\u00a0Suzuki AC,<\/span>\u00a0<\/span>\u00a0Arakawa K<\/span><\/strong>,<\/span>\u00a0<\/span>Kunieda T,<\/span> Matsumoto M,\u00a0“Comparison of Sexual Reproductive Behaviors in Two Species of Macrobiotidae (Tardigrada: Eutardigrada)”,<\/span>\u00a0<\/span>Zoological Science<\/em><\/span>\u00a036<\/strong>(2), (12 April 2019).\u00a0(Publisher<\/a>)<\/span><\/li>\n
  95. Ohshima Y, Kono N<\/span><\/strong>, Yokota Y, Watanabe S, Sasaki I, Ishioka NS, Sakashita T, Arakawa K<\/span><\/strong>, “Anti-tumor effects and potential therapeutic response biomarkers in a-emitting\u00a0meta<\/i>–211<\/sup><\/span><\/span>At-astato-benzylguanidine therapy for malignant pheochromocytoma explored by RNA-sequencing.\u201d Theranostics<\/em> 2019; 9(6):1538-1549. (Publisher<\/a>)<\/li>\n
  96. \u00a0Ii KM<\/span><\/strong>, Kono N<\/span><\/strong>, Paulino-Lima IG, Tomita M, Rothschild LJ, Arakawa K<\/span><\/strong>, “Complete Genome Sequence of Arthrobacter sp<\/i>. Strain MN05-02, a UV-Resistant Bacterium from a Manganese Deposit in the Sonoran Desert”, J Genomics<\/em> 2019;\u00a07:18-25. (Publisher<\/a>)<\/li>\n
  97. \u00a0Fleming J<\/u><\/strong>, Kristensen R, S\u00f8rensen Martin, Park T,\u00a0Arakawa K<\/u><\/ins><\/strong>, Blaxter M, Rebecchi L, Guidetti R, Williams T, Roberts N, Vinther J, Pisani D, “Molecular palaeontology illuminates evolution of ecdysozoan vision”, Proceedings of the Royal Society B<\/i>, 2018, 285<\/span>(1892):2180<\/span>.(Publisher<\/a>)<\/li>\n
  98. Kono N<\/u><\/strong>, Tomita M, Arakawa K<\/u><\/strong>,\u00a0“Accelerated laboratory evolution reveals the influence of replication on the GC skew in\u00a0<\/span>Escherichia coli”,\u00a0Genome Biology and Evolution<\/em>, <\/em>2018, evy237. (Publisher<\/a>)<\/li>\n
  99. Arakawa K<\/u><\/strong>*<\/u><\/b><\/ins>, Kono N<\/u><\/strong>, Ohtoshi R, Hiroyuki N, Tomita M, “The complete mitochondrial genome of Eumeta variegata (Lepidoptera: Psychidae)”, Mitochondrial DNA B Resour<\/em>, 2018, 3<\/strong>(2):812-813. (Publisher<\/a>)<\/li>\n
  100. Arakawa K<\/u><\/strong>*<\/u><\/b><\/ins>\u00a0“The complete mitochondrial genome of Echiniscus testudo (Heterotardigrada: Echiniscidae)”, Mitochondrial DNA B Resour<\/em>, 2018, 3<\/strong>(2):810-811. (Publisher<\/a>)<\/li>\n
  101. Yoshida Y<\/u><\/strong>, Konno S<\/u><\/strong>, Nishino R<\/u><\/strong>, Murai Y<\/u><\/strong>, Tomita M, Arakawa K*<\/ins><\/u><\/strong>, “Ultralow Input Genome Sequencing Library Preparation from a Single Tardigrade Specimen”, J. Vis. Exp<\/em>., 2018, 137<\/strong>:e57615. (Publisher<\/a>)<\/li>\n
  102. Stec D, Arakawa K*<\/ins><\/u><\/strong>, Michalczyk \u0141, “An integrative description of\u00a0<\/span>Macrobiotus shonaicus<\/i>\u00a0sp. nov. (Tardigrada: Macrobiotidae) from Japan with notes on its phylogenetic position within the\u00a0<\/span>hufelandi<\/i>\u00a0group”,\u00a0PLoS ONE,<\/i>\u00a0<\/span><\/em>2018,\u00a0<\/span>13<\/strong>(2): e0192210. (Publisher<\/a>)<\/span><\/li>\n
  103. Ohta T,\u00a0<\/span>Kawashima T,\u00a0<\/span>\u00a0Shinozaki NO<\/span>, Dobashi A,<\/span>\u00a0Hiraoka S,\u00a0<\/span>Hoshino T, Kanno K, Kataoka T, Kawashima S,<\/span>\u00a0<\/span>Matsui M,<\/span>\u00a0Nemoto W,\u00a0<\/span>\u00a0Nishijima S,\u00a0<\/span>Suganuma N, Suzuki H, Taguchi Y-h, Takenaka Y, Tanigawa Y, Tsuneyoshi M,\u00a0<\/span>Yoshitake K,\u00a0<\/span>Sato Y,\u00a0<\/span>Yamashita R,\u00a0<\/span>Arakawa K<\/u><\/strong>,\u00a0<\/span>Iwasaki W, “<\/span><\/span>Collaborative environmental DNA sampling from petal surfaces of flowering cherry\u00a0<\/span>Cerasus<\/em>\u2009\u00d7\u2009<\/span>yedoensis<\/em>\u00a0\u2018Somei-yoshino\u2019 across the Japanese archipelago”,\u00a0J. Plant Res.,<\/em>\u00a02018, 131<\/strong>(4):709-717. (Publisher<\/a>)<\/span><\/li>\n
  104. Kono N<\/u><\/strong>, Tomita M, Arakawa K<\/u><\/strong>, “eRP arrangement: a strategy for assembled genomic contig rearrangement based on replication profiling in bacteria” BMC Genomics<\/em>, 2017 18<\/strong>:784.<\/i>\u00a0(Publisher<\/a>)<\/span><\/li>\n
  105. \n
    Malay AD, \u00a0Arakawa K<\/strong>,<\/u> Numata K, “Analysis of repetitive amino acid motifs reveals the essential features of spider dragline silk proteins” PloS One,<\/em>\u00a02017,12<\/strong>(8):e0183397. (PubMed<\/a>)<\/span><\/div>\n<\/li>\n
  106. Yoshida Y<\/span><\/strong>, Koutsovoulos G, Laetsch DR, Stevens L, Kumar S, Horikawa DD<\/span><\/strong>, Ishino K, Komine S, Kunieda T, Tomita M, Blaxter M, Arakawa K<\/span><\/strong>, “Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus”, PLoS Biol<\/em>, 2017, 15<\/strong>(7):e2002266. (PubMed<\/a>)<\/li>\n
  107. Tanaka Y, Ogawa T, Maruta T, Yoshida Y<\/span><\/strong>, Arakawa K<\/span><\/strong>, Ishikawa T, “Glucan synthase-like 2 is indispensable for paramylon synthesis in Euglena gracilis”,\u00a0FEBS Lett<\/em>, 2017, 591<\/strong>(10): 1360-1370. (PubMed<\/a>)<\/li>\n
  108. Iwai H<\/strong><\/span>,\u00a0Horikawa\u00a0DD*<\/strong><\/span>, Arakawa K<\/strong><\/span>,\u00a0Tomita M, Komatsu T, Maruyama M, “Rearing and observation of immature stages of the hoverfly Microdon katsurai (Diptera, Syrphidae)”,\u00a0Biodiversity Data Journal<\/em>, 2016, 4<\/strong>: e10185.(PubMed<\/a>)<\/li>\n
  109. Hashimoto T,\u00a0\u00a0Horikawa\u00a0DD*<\/strong><\/span>, Saito Y, Kuwahara H, Kozuka-Hata H, Shin-I T, Minakuchi Y, Ohishi K, Motoyama A, \u00a0Aizu M, Enomoto A, Kondo K, Tanaka S, Hara Y, Koshikawa S, Sagara H, Miura T, Yokobori S, Miyagawa K, Suzuki Y, Kubo T, Oyama M, Kohara Y, Fujiyama A,\u00a0Arakawa K\u00a0<\/strong><\/span>, Katayama T, Toyoda A, Kunieda T, “Extremotolerant tardigrade genome and improved radiotolerance of human cultured cells by tardigrade-unique protein”, Nature Communications, <\/em>2016,\u00a07<\/strong>:12808. (PubMed<\/a>)<\/li>\n
  110. Arakawa K*<\/ins><\/strong><\/span>, Yoshida Y, Tomita M, “Genome sequencing of a single tardigrade Hypsibius dujardini individual\u201d, <\/span>Scientific Data<\/em>, 2016, 3<\/strong>:160063. (<\/span>PubMed<\/a>)<\/span><\/li>\n
  111. Arakawa K*<\/ins><\/strong><\/span>, “No evidence for extensive horizontal gene transfer from the draft genome of a tardigrade”, PNAS<\/em>, 2016, 113<\/strong>(22):E3057. (PubMed<\/a>)<\/li>\n
  112. Yoshida Y<\/u><\/strong>, Tomiyama T, Maruta T, Tomita M, Ishikawa T,\u00a0Arakawa K*<\/ins><\/strong><\/span>, “De novo assembly and comparative transcriptome analysis of Euglena gracilis in response to anaerobic conditions”, BMC Genomics<\/em>, 2016, 17<\/strong>(1):182. (PubMed<\/a>)<\/li>\n
  113. Kono N<\/strong><\/span>, Nakamura H, Ito Y, Tomita M,\u00a0Arakawa K*<\/ins><\/strong><\/span>, “Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly”, Molecular Ecology Resources<\/em>, 2016,\u00a016<\/strong>(3):662-672. (PubMed<\/a>)<\/li>\n
  114. Horikawa DD,<\/strong>\u00a0Arakawa K<\/ins><\/strong><\/span>, “Tardigrades – Ultimate animals surviving extreme environments”,\u00a0SFC Journal<\/em>, 2015,\u00a015<\/strong>(1), 246-260. (Publisher<\/a>)<\/li>\n
  115. Oshita K, Tomita M,\u00a0Arakawa K*<\/ins><\/strong><\/span>, “G-Links: a gene-centric link acquisition service”, F1000 Research<\/em>, 2015, 3<\/strong>:285. (PubMed<\/a>)<\/li>\n
  116. Tanaka S, Tanaka J, Miwa Y, Horikawa DD<\/strong><\/span>, Katayama T,\u00a0Arakawa K<\/ins><\/strong><\/span>, Toyoda A, Kubo T, Kunieda T, “Novel Mitochondria-Targeted Heat-Soluble Proteins Identified in the Anhydrobiotic Tardigrade Improve Osmotic Tolerance of Human Cells”, PLoS One<\/em>, 2015, 10<\/strong>:e0118272. (PubMed<\/a>)<\/li>\n
  117. Miyamoto M, Motooka D, Gotoh K, Imai T, Yoshitake K, Goto N, Iida T, Yasunaga T, Horii T,\u00a0Arakawa K<\/ins><\/strong><\/span>, Kasahara M, Nakamura S, “Performance comparison of second- and third-generation sequencers using a bacterial genome with two chromosomes”, BMC Genomics<\/em>, 2014, 15<\/strong>:699. (PubMed<\/a>)<\/li>\n
  118. Kono N<\/strong><\/span>,\u00a0Arakawa K<\/ins><\/strong><\/span>, Sato M, Yoshikawa H, Tomita M, Itaya M, “Undesigned selection for replication termination of bacterial chromosomes”, J. Mol. Biol<\/em>. 2014, 426<\/strong>(16):2918-2927. (PubMed<\/a>)<\/li>\n
  119. Arakawa K*<\/ins><\/strong><\/span>, Tomita M, “Genome Analysis Workshop: a Personal Genomics class at Keio SFC”, Keio SFC Journal<\/em>, 2014, 14<\/strong>(1):158-177. (Publisher<\/a>)<\/li>\n
  120. Nakada T, Tsuchida Y,\u00a0Arakawa K<\/ins><\/strong><\/span>, Ito T and Tomita M, “Hybridization between Japanese and North American Chlamydomonas reinhardtii (Volvocales, Chlorophyceae)”, Phycological Research<\/em>, 2014, 62<\/strong>(3):232-236. (Publisher<\/a>)<\/li>\n
  121. BioHackathon 2011\/2012, “BioHackathon series in 2011 and 2012: penetration of ontology and Linked Data in life science domains”, Journal of Biomedical Semantics<\/em>, 2014, 5<\/strong>:5. (Publisher<\/a>)<\/li>\n
  122. Arakawa K<\/strong><\/span>, “Comparative metabolomics of anhydrobiosis in tardigrade Ramazzottius varieornatus”,\u00a0Journal of Japanese Society for Extremophiles<\/em>, 2013,\u00a011<\/strong>(2), 75-82. (Publisher<\/a>)<\/li>\n
  123. Arakawa K<\/strong><\/span>, Tomita M, “Merging Multiple Omics Datasets In Silico: Statistical Analyses and Data Interpretation”,\u00a0Methods Mol. Biol.<\/em>\u00a02013,\u00a0985<\/strong>:459-470. (PubMed<\/a>)<\/li>\n
  124. Itaya H, Oshita K,\u00a0Arakawa K<\/ins><\/strong><\/span>, Tomita M, “GEMBASSY: an EMBOSS Associated Software Package for Comprehensive Genome Analyses”, Source Code for Biology and Medicine<\/em>, 2013, 8<\/strong>(1):17. (PubMed<\/a>)<\/li>\n
  125. Horikawa DD<\/strong><\/span>, Cumbers J, Sakakibara I, Rogoff D, Leuko S, Harnoto R,\u00a0Arakawa K<\/ins><\/strong><\/span>, Katayama T, Kunieda T, Toyoda A, Fujiyama A, Rothschild LJ, “Analysis of DNA Repair and Protection in the Tardigrade Ramazzottius varieornatus and Hypsibius dujardini after Exposure to UVC Radiation”, PLoS One<\/em>, 2013, 8<\/strong>(6):e6479. (PubMed<\/a>)<\/li>\n
  126. Hisano Y, Ota S,\u00a0Arakawa K<\/ins><\/strong><\/span>, Muraki M, Kono N<\/strong><\/span>, Oshita K, Sakuma T, Tomita M, Yamamoto T, Okada Y, Kawahara A, “Quantitative assay for TALEN activity at endogenous genomic loci”, Biology Open<\/em>, 2013, 2<\/strong>(4):363-367. (Publisher<\/a>)<\/li>\n
  127. BioHackathon 2010, “The 3rd DBCLS BioHackathon: improving life science data integration with semantic Web technologies”, Journal of Biomedical Semantics<\/em>, 2013, 4<\/strong>:6. (Publisher<\/a>)<\/li>\n
  128. Yamaguchi A, Tanaka S, Yamaguchi S, Kuwahara H, Takamura C, Ohmi S, Horikawa DD<\/strong><\/span>, Toyoda A, Katayama T,\u00a0Arakawa K<\/ins><\/strong><\/span>, Fujiyama A, Kubo T, Kunieda T, “Two families of novel abundant heat-soluble proteins in an anhydrobiotic tardigrade”, PLoS One<\/em>, 2012, 7<\/strong>(8):e44209. (PubMed<\/a>)<\/li>\n
  129. Kono N<\/strong><\/span>,\u00a0Arakawa K*<\/ins><\/strong><\/span>, Tomita M, “Validation of bacterial replication termination models using simulation of genomic mutations”, PLoS One<\/em>, 2012, 7<\/strong>(4): e34526. (PubMed<\/a>)<\/li>\n
  130. Arakawa K*<\/ins><\/strong><\/span>, Tomita M, “Measures of Compositional Strand Bias Related to Replication Machinery and its Applications”, Current Genomics<\/em>, 2012, 13<\/strong>(1):4-15. (PubMed<\/a>)<\/li>\n
  131. BioHackathon 2009, “The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications”, Journal of Biomedical Semantics<\/em>, 2011, 2<\/strong>:4. (PubMed<\/a>)<\/li>\n
  132. Toya Y, Kono N<\/strong><\/span>,\u00a0Arakawa K*<\/ins><\/strong><\/span>, Tomita M, “Metabolic flux analysis and visualization”, Journal of Proteome Research<\/em>, 2011, 10<\/strong>(8):3313-3323. (PubMed<\/a>)<\/li>\n
  133. Oshita K,\u00a0Arakawa K*<\/ins><\/strong><\/span>. Tomita M, “KBWS: an EMBOSS associated package for accessing bioinformatics web services”, Source Code for Biology and Medicine<\/em>, 2011, 6<\/strong>(1):8. (PubMed<\/a>)<\/li>\n
  134. Kono N<\/strong><\/span>,\u00a0Arakawa K*<\/ins><\/strong><\/span>, Tomita M, “Comprehensive prediction of chromosome dimer resolution sites in bacterial genomes”, BMC Genomics<\/em>, 2011, 12<\/strong>(1):19. (PubMed<\/a>)<\/li>\n
  135. BioHackathon2008, “The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows”, Journal of Biomedical Semantics<\/em>, 2010, 1<\/strong>:8. (PubMed<\/a>)<\/li>\n
  136. Arakawa K*<\/ins><\/strong><\/span>, Kido N, Oshita K, Tomita M, “G-language Genome Analysis Environment with REST and SOAP Web Service Interfaces”, Nucleic Acids Research<\/em>, 2010, 48<\/strong>:W700-W705. (PubMed<\/a>)<\/li>\n
  137. Arakawa K*<\/ins><\/strong><\/span>, Suzuki H, Tomita M, “Quantitative analysis of replication-related mutation and selection pressures in bacterial chromosomes and plasmids using generalised GC skew index”, BMC Genomics<\/em>, 2009, 10<\/strong>:640. (PubMed<\/a>)<\/li>\n
  138. Kono N<\/strong><\/span>,\u00a0Arakawa K*<\/ins><\/strong><\/span>, Ogawa R, Kido N, Oshita K, Ikegami K, Tamaki S, Tomita M, “Pathway Projector: Web-based Zoomable Pathway Browser using KEGG Atlas and Google Maps API”, PLoS One<\/em>, 2009, 4<\/strong>(11):e7710. (PubMed<\/a>)<\/li>\n
  139. Arakawa K*<\/ins><\/strong><\/span>, Oshita K, Tomita M, “A web server for interactive and zoomable Chaos Game Representation images”, Source Code for Biology and Medicine<\/em>, 2009, 4<\/strong>:6. (PubMed<\/a>)<\/li>\n
  140. Arakawa K*<\/ins><\/strong><\/span>, Tamaki S, Kono N<\/strong><\/span>, Kido N, Ikegami K, Ogawa R, Tomita M, “Genome Projector: zoomable genome map with multiple views”, BMC Bioinformatics<\/em>, 2009, 10<\/strong>:31.(PubMed<\/a>)<\/li>\n
  141. Arakawa K<\/strong><\/span>, Yachie N, Tomita M, “Visualizing Complex Omics Information – Scientific Visualization for Genomics and Systems Biology”,\u00a0BIOforum Europe<\/em>\u00a02008,\u00a06<\/strong>:27-29 (PDF<\/a>).<\/li>\n
  142. Arakawa K*<\/ins><\/strong><\/span>, Suzuki H, Tomita M, “Computational Genome Analysis Using The G-language System”, Genes, Genomes and Genomics<\/em>, 2008, 2<\/strong>(1): 1-13.(PDF<\/a>)<\/li>\n
  143. Ogawa Y,\u00a0Arakawa K*<\/ins><\/strong><\/span>, Kaizu K, Miyoshi F, Nakayama Y, Tomita M, “Comparative study of circadian oscillatory network models of Drosophila”, Artificial Life<\/em>, 2008, 14<\/strong>(1):29-48.(PubMed<\/a>)<\/li>\n
  144. Arakawa K<\/ins><\/span>, Tomita M, “Selection effects on the positioning of genes and gene structures from the interplay of replication and transcription in bacterial genomes”, Evolutionary Bioinformatics<\/em>, 2007, 3<\/strong>:279-286. (PubMed<\/a>)<\/li>\n
  145. Arakawa K<\/ins><\/strong><\/span>, Tomita M, “The GC skew index: a measure of genomic compositional asymmetry and the degree of replicational selection”, Evolutionary Bioinformatics<\/em>, 2007, 3<\/strong>:145-154. (PubMed<\/a>)<\/li>\n
  146. Tamaki S,\u00a0Arakawa K*<\/ins><\/strong><\/span>, Kono N<\/strong><\/span>, Tomita M, “Restauro-G: A Rapid Genome Re-Annotation System for Comparative Genomics”, Genomics Proteomics Bioinformatics<\/em>, 2007, 5<\/strong>(1): 53-58. (PubMed<\/a>)<\/li>\n
  147. Ishii N, Nakahigashi K, Baba T, Robert M, Soga T, Kanai A, Hirasawa T, Naba M, Hirai K, Hoque A, Ho PY, Kakazu Y, Sugawara K, Igarashi A, Harada A, Masuda T, Sugiyama N, Togashi T, Hasegawa M, Takai Y, Yugi K,\u00a0Arakawa K<\/ins><\/strong><\/span>, Iwata N, Toya Y, Nakayama Y, Nishioka T, Shimizu K, Mori H, Tomita M, “Multiple High-Throughput Analyses Monitor the Response of E. coli to Perturbations”, Science<\/em>, 2007, 316<\/strong>(5824): 593-597. (PubMed<\/a>)<\/li>\n
  148. Sugahara J, Yachie N,\u00a0Arakawa K*<\/ins><\/strong><\/span>, Tomita M, “In Silico Screening of Archaeal tRNA-encoding Genes Having Multiple Introns with Bulge-Helix-Bulge Splicing Motifs”, RNA, 2007<\/em>, 13<\/strong>(5): 671-681. (PubMed<\/a>)<\/li>\n
  149. Arakawa K<\/ins><\/strong><\/span>, Uno R, Nakayama Y, Tomita M, “Validating the significance of genomic properties of Chi sites from the distribution of all octamers in Escherichia coli”, Gene<\/em>, 2007, 392<\/strong>(1-2):239-246. (PubMed<\/a>)<\/li>\n
  150. Arakawa K<\/ins><\/strong><\/span>, Saito R, Tomita M, “Noise-reduction filtering for accurate detection of replication termini in bacterial genomes”, FEBS Letters<\/em>, 2007, 581<\/strong>(2):253-258. (PubMed<\/a>).<\/li>\n
  151. Arakawa K<\/strong><\/span>, Tomita M, “Large-scale Modeling for Systems Biology”,\u00a0BIOforum Europe<\/em>, 2006,\u00a010<\/strong>:54-55 (PDF<\/a>).<\/li>\n
  152. Arakawa K<\/strong><\/span>, Tomita M, “G-language System as a platform for large-scale analysis of high-throughput omics data”,\u00a0Journal of Pesticide Science<\/em>, 2006,\u00a031<\/strong>(3):282-288(PDF<\/a>)<\/li>\n
  153. Kono N<\/strong><\/span>,\u00a0Arakawa K*<\/ins><\/strong><\/span>, Tomita M, “MEGU: Pathway mapping web-service based on KEGG and SVG”, In Silico Biology<\/em>, 2006, 6<\/strong>(6):621-655. (PubMed<\/a>).<\/li>\n
  154. Yachie N,\u00a0Arakawa K*<\/ins><\/strong><\/span>, Tomita M, “On the Interplay of Gene Positioning and the Role of Rho- Independent Terminators in Escherichia coli”, FEBS Letters<\/em>, 2006, 580<\/strong>(30):6909-6914.(PubMed<\/a>).<\/li>\n
  155. Arakawa K<\/ins><\/strong><\/span>, Yamada Y, Shinoda K, Nakayama Y, Tomita M, “GEM System: Automatic prototyping of cell-wide metabolic pathway models from genomes”, BMC Bioinformatics<\/em>, 2006, 7<\/strong>:168 (PubMed<\/a>)<\/li>\n
  156. Arakawa K<\/ins><\/strong><\/span>, Nakayama Y, Tomita M, “GPAC: Benchmarking the sensitivity of genome informatics analysis to genome annotation completeness”, In Silico Biology<\/em>, 2006, 6<\/strong>:0006 (PubMed<\/a>)<\/li>\n
  157. Arakawa K<\/ins><\/strong><\/span>, Suzuki H, Fujishima K, Fujimoto K, Ueda S, Matsui M, Tomita M, “Comprehensive software suite for bioinformatics analysis of cDNAs”, Genomics Proteomics Bioinformatics<\/em>, 2005, 3<\/strong>(3):179-188 (PubMed<\/a>)<\/li>\n
  158. Arakawa K<\/ins><\/strong><\/span>, Kono N<\/strong><\/span>, Yamada Y, Mori H, and Tomita M, “KEGG-based pathway visualization tool for complex omics data”, In Silico Biology<\/em>, 2005, 5<\/strong>:0039 (PubMed<\/a>)<\/li>\n
  159. Arakawa K<\/ins><\/strong><\/span>, Mori K, Ikeda K, Matsuzaki T, Kobayashi Y, Tomita M, “G-language Genome Analysis Environment: a workbench for nucleotide sequence data mining”, Bioinformatics<\/em>, 2003, 19<\/strong>(2):305-306 (PubMed<\/a>)<\/li>\n
  160. Uno R, Nakayama Y,\u00a0Arakawa K<\/ins><\/strong><\/span>, Tomita M, “The orientation bias of Chi sequences is a general tendency of G-rich oligomers”,Gene<\/em>, 2000, 259<\/strong>(1-2):207-215 (PubMed<\/a>)<\/li>\n<\/ol>\n

     <\/p>\n

     <\/p>\n

     <\/p>\n

    \u00a0Review Papers (Japanese)<\/span><\/p>\n

     <\/p>\n

     <\/p>\n

     <\/p>\n

      \n
    1. \u8352\u5ddd\u548c\u6674<\/span><\/strong><\/span>, \u201c\u907a\u4f1d\u5b50\u767a\u73fe\u6280\u8853TardiVec \u304c\u62d3\u304f\u30af\u30de\u30e0\u30b7\u4e7e\u7720\u95a2\u9023\u30bf\u30f3\u30d1\u30af\u8cea\u7814\u7a76\u306e\u65b0\u5730\u5e73\u201c, \u4f4e\u6e29\u751f\u7269\u5de5\u5b66\u4f1a\u8a8c, 2025, 71<\/strong>(2), 47-54. (Publisher<\/a>)<\/li>\n
    2. \u7530\u4e2d\u51b4<\/strong><\/span>, \u8352\u5ddd\u548c\u6674<\/strong><\/span>, \u201c\u6700\u5f37\u751f\u7269\u30af\u30de\u30e0\u30b7\u306e\u4e7e\u7720\u30e1\u30ab\u30cb\u30ba\u30e0\u306e\u89e3\u5e2d\u201c, Keio SFC Journal, 2023, 22<\/strong>(2), 178-190. (Publisher<\/a>)<\/strong><\/span><\/li>\n
    3. \u8352\u5ddd\u548c\u6674<\/strong><\/span>, \u201c\u30af\u30e21,000\u7a2e\u306e\u89e3\u6790\u304b\u3089\u30af\u30e2\u7cf8\u9ad8\u6a5f\u80fd\u767a\u73fe\u30e1\u30ab\u30cb\u30ba\u30e0\u3092\u89e3\u660e\u3059\u308b\u201c, \u5b9f\u9a13\u533b\u5b66, 2023, 41<\/strong>(4), 580-584. (Publisher<\/a>)<\/strong><\/span><\/li>\n
    4. \u8352\u5ddd\u548c\u6674<\/strong><\/span>, \u201c\u751f\u7269\u6750\u6599\u30fb\u751f\u4f53\u6a5f\u80fd\u767a\u73fe\u3068\u6db2\u2012\u6db2\u76f8\u5206\u96e2: \u30af\u30de\u30e0\u30b7\u4e7e\u7720\u3068\u30af\u30e2\u306e\u7cf8\u201d,\u00a0\u751f\u5316\u5b66<\/em>, 2022,\u00a094<\/strong>(4), 537-547. (Web<\/a>).<\/li>\n
    5. \u8352\u5ddd\u548c\u6674<\/span><\/b><\/span>, \u201c\u30af\u30e2\u7cf8\u9ad8\u6a5f\u80fd\u767a\u73fe\u30e1\u30ab\u30cb\u30ba\u30e0\u306e\u89e3\u660e\uff1a\u4eba\u5de5\u30af\u30e2\u7cf8\u306e\u5f37\u5ea6\u3092\u500d\u5316\u3059\u308bSpiCE\u306e\u767a\u898b\u201d, \u751f\u7269\u7269\u7406<\/em>, 2022, 62<\/strong>(3),\u00a0<\/span>181-183<\/span>. (Web<\/a>).<\/li>\n
    6. \u8352\u5ddd\u548c\u6674,<\/b><\/ins><\/span>“\u6700\u5f37\u751f\u7269\u30af\u30de\u30e0\u30b7\u306e\u5fa1\u5bb6\u9a12\u52d5\u3068\u30aa\u30fc\u30d7\u30f3\u30b5\u30a4\u30a8\u30f3\u30b9”, \u30d0\u30a4\u30aa\u30b5\u30a4\u30a8\u30f3\u30b9\u3068\u30a4\u30f3\u30c0\u30b9\u30c8\u30ea\u30fc, 2017, 75<\/b>(2), 150. (Web<\/a>)<\/li>\n
    7. \u8352\u5ddd\u548c\u6674<\/b><\/ins><\/span>, “G-language System\u306b\u3088\u308b\u751f\u7269\u60c5\u5831\u30c7\u30fc\u30bf\u30d9\u30fc\u30b9\u6d3b\u7528\u6cd5”, <\/span>\u8a08\u6e2c\u3068\u5236\u5fa1<\/em>, 2014, <\/span>53<\/strong>(5), 419-425. (<\/span>Publisher<\/a>)<\/span><\/li>\n
    8. \u8352\u5ddd\u548c\u6674<\/ins><\/strong><\/span>, “\u5909\u308f\u308a\u3086\u304f\u7814\u7a76\u8005\u30b3\u30df\u30e5\u30cb\u30c6\u30a3\u3068\u5b66\u4f1a\u306e\u7fa4\u96c4\u5272\u62e0”, \u5b9f\u9a13\u533b\u5b66<\/em>, 2013, 31<\/strong>(6), 952. (Publisher<\/a>)<\/li>\n
    9. \u5800\u5ddd\u5927\u6a39<\/strong><\/span>\uff0c\u963f\u90e8 \u6e09\uff0e\u8352\u5ddd\u548c\u6674<\/ins><\/strong><\/span>\uff0c\u4f1a\u6d25\u667a\u5e78\uff0c\u7247\u5c71\u4fca\u660e\uff0c\u570b\u679d\u6b66\u548c\uff0c\u9234\u6728 \u5fe0\uff0c\u8c4a\u7530 \u6566, “\u7814\u30b3\u30df\u30e5\u767d\u66f8 \u7b2c4\u56de\u30af\u30de\u30e0\u30b7\u7814\u7a76\u8005\u30b3\u30df\u30e5\u30cb\u30c6\u30a3\u30fc\uff1a\u5e02\u6c11\u3068\u306e\u5bfe\u8a71\u30c4\u30fc\u30eb\u3068\u3057\u3066\u306e\u30af\u30de\u30e0\u30b7”, \u7d30\u80de\u5de5\u5b66<\/em>, 2012, 31<\/strong>(11). (Web<\/a>).<\/li>\n
    10. \u8352\u5ddd\u548c\u6674<\/ins><\/strong><\/span>, “\u751f\u547d\u6d3b\u52d5\u3068\u306f\u4f55\u304b – \u751f\u547d\u60c5\u5831\u79d1\u5b66\u304c\u5411\u3046\u3079\u304d\u9053”, \u65e5\u672c\u30d0\u30a4\u30aa\u30a4\u30f3\u30d5\u30a9\u30de\u30c6\u30a3\u30af\u30b9\u5b66\u4f1a\u30cb\u30e5\u30fc\u30b9\u30ec\u30bf\u30fc<\/em>, 2012, 25<\/strong>:2-3. (PDF<\/a>).<\/li>\n
    11. \u8352\u5ddd\u548c\u6674<\/ins><\/strong><\/span>, \u5165\u6c5f\u76f4\u6a39, \u8c37\u4e0a\u8ce2\u745e, \u4e2d\u6751\u6607\u592a, “\u7814\u30b3\u30df\u30e5\u767d\u66f8 \u7b2c3\u56deNGS\u73fe\u5834\u306e\u4f1a\uff1a\u6b21\u4e16\u4ee3\u30b7\u30fc\u30af\u30a8\u30f3\u30b5\u30fc\u306e\u73fe\u5834\u306b\u3044\u308b\u4eba\u305f\u3061\u306e\u4ea4\u6d41\u306e\u5834”, \u7d30\u80de\u5de5\u5b66<\/em>, 2012, 31<\/strong>(9). (Web<\/a>).<\/li>\n
    12. \u8352\u5ddd\u548c\u6674<\/ins><\/strong><\/span>, “G-language Project: \u30d0\u30a4\u30aa\u30a4\u30f3\u30d5\u30a9\u30de\u30c6\u30a3\u30af\u30b9\u7814\u7a76\u306e\u305f\u3081\u306e\u30ef\u30fc\u30af\u30d9\u30f3\u30c1”, \u65e5\u672c\u30d0\u30a4\u30aa\u30a4\u30f3\u30d5\u30a9\u30de\u30c6\u30a3\u30af\u30b9\u5b66\u4f1a\u30cb\u30e5\u30fc\u30b9\u30ec\u30bf\u30fc<\/em>, 2012, 24<\/strong>:4-5 (PDF<\/a>).<\/li>\n
    13. \u516b\u8c37\u525b\u53f2\u3001\u5165\u6c5f\u76f4\u6a39\u3001\u8352\u5ddd\u548c\u6674<\/ins><\/strong><\/span>, “Close Up \u5b9f\u9a13\u6cd5\uff1a\u6b21\u4e16\u4ee3\u30b7\u30fc\u30af\u30a8\u30f3\u30b5\u30fc\u6d3b\u7528\u8853”, \u5b9f\u9a13\u533b\u5b66<\/em>, 2011, 7\u6708\u53f7<\/li>\n
    14. \u8352\u5ddd\u548c\u6674<\/ins><\/strong><\/span>, “\u6b21\u4e16\u4ee3\u30d0\u30a4\u30aa\u30a4\u30f3\u30d5\u30a9\u30de\u30c6\u30a3\u30af\u30b9\u30c4\u30fc\u30eb\u3092\u76ee\u6307\u3057\u3066 -G-language Project-“, \u65e5\u672c\u30d0\u30a4\u30aa\u30a4\u30f3\u30d5\u30a9\u30de\u30c6\u30a3\u30af\u30b9\u5b66\u4f1a\u30cb\u30e5\u30fc\u30b9\u30ec\u30bf\u30fc<\/em>, 2006, 12<\/strong>:3-4 (PDF<\/a>).<\/li>\n<\/ol>\n

       <\/p>\n

       <\/p>\n

       <\/p>\n

      \u00a0Books<\/h1>\n

       <\/p>\n

      \u00a0<\/span>\u00a0<\/span><\/p>\n

       <\/p>\n

        \n
      1. \u201c\u90fd\u5e02\u3068\u30a2\u30fc\u30c8\u3068\u30a4\u30ce\u30d9\u30fc\u30b7\u30e7\u30f3\u2015\u5275\u9020\u6027\u3068\u30e9\u30a4\u30d5\u30b9\u30bf\u30a4\u30eb\u304c\u63cf\u304f\u90fd\u5e02\u672a\u6765<\/span>\u201c, \u5171\u8457, \u5e7b\u51ac\u820e<\/span>, 2024, ISBN:9784344041981<\/span>\u00a0<\/span>(\u7d00\u4f0a\u570b\u5c4b\u66f8\u5e97<\/a>)<\/span><\/li>\n
      2. \u201cSFC\u30d0\u30a4\u30aa\u306e\u8ecc\u8de1\u201c, \u8352\u5ddd\u548c\u6674(\u7de8), KEIO SFC JOURNAL, 2023, 22(2). (Publisher<\/a>)<\/li>\n
      3. \u201c\u65b0\u7a2e\u767a\u898b\uff01 \u898b\u3064\u3051\u3066\u3001\u8abf\u3079\u3066\u3001\u540d\u4ed8\u3051\u308b\u65b9\u6cd5\u201c, \u5171\u8457, \u5c71\u3068\u6e13\u8c37\u793e, 2022, ISBN-13:\u00a0<\/span>978-4635063203<\/span>\u00a0<\/span>(Amazon<\/a>)<\/li>\n
      4. \u201c\u5b9f\u9a13\u533b\u5b66\u5225\u518a\u3000\u6700\u5f37\u306e\u30b9\u30c6\u30c3\u30d7UP\u30b7\u30ea\u30fc\u30ba \u30ed\u30f3\u30b0\u30ea\u30fc\u30c9WET&DRY\u89e3\u6790\u30ac\u30a4\u30c9\u3000\u30b7\u30fc\u30af\u30a8\u30f3\u30b9\u3092\u3082\u3063\u3068\u81ea\u7531\u306b\uff01\u201c, \u7de8\u96c6, \u7f8a\u571f\u793e, 2021, ISBN-13: 978-4-7581-2253-5 (Publisher<\/a>)<\/span><\/li>\n
      5. “Nanopore Sequencing Methods and Protocols”,\u00a0\u8352\u5ddd\u548c\u6674, Springer Nature, 2023(SpringerLink<\/a>)<\/span><\/span><\/li>\n
      6. “\u30ed\u30f3\u30b0\u30ea\u30fc\u30c9WET&DRY\u89e3\u6790\u30ac\u30a4\u30c9\u3000\u30b7\u30fc\u30af\u30a8\u30f3\u30b9\u3092\u3082\u3063\u3068\u81ea\u7531\u306b\uff01”, \u8352\u5ddd\u548c\u6674 \u5bae\u672c\u771f\u7406\u7de8 ,\u7f8a\u571f\u793e, 2021(\u5b9f\u9a13\u533b\u5b66online<\/a>)<\/span><\/li>\n
      7. “\u6b21\u4e16\u4ee3\u30b7\u30fc\u30af\u30a8\u30f3\u30b5\u30fcDRY\u89e3\u6790\u6559\u672c\u00a0\u5358\u884c\u672c”, \u6e05\u6c34\u539a\u5fd7<\/span>\u00a0<\/span>\u574a\u8fb2\u79c0\u96c5<\/span>\u00a0\u00a0(\u8457, \u7de8\u96c6), \u5b66\u7814\u30e1\u30c7\u30a3\u30ab\u30eb\u79c0\u6f64\u793e, 2019(Amazon<\/a>)<\/span><\/li>\n
      8. “\u3069\u3053\u3067\u3082\u3000\u8ab0\u3067\u3082\u3000\u3088\u308a\u9577\u304f\u3000\u30ca\u30ce\u30dd\u30a2\u30b7\u30fc\u30af\u30a8\u30f3\u30b5\u30fc\u304c\u7814\u7a76\u306e\u5e38\u8b58\u3092\u5909\u3048\u308b\uff01”, \u8352\u5ddd\u548c\u6674 \u4f01\u753b, 2018(\u5b9f\u9a13\u533b\u5b66online<\/a>)<\/span><\/li>\n
      9. “\u4eba\u5de5\u77e5\u80fd\u5b66\u5927\u8f9e\u5178”, \u4eba\u5de5\u77e5\u80fd\u5b66\u4f1a \u7de8, \u5171\u7acb\u51fa\u7248, 2017 (Amazon<\/a>)<\/li>\n
      10. “\u6c34\u306e\u751f\u304d\u7269\uff08\u5b66\u7814\u306e\u56f3\u9451LIVE\uff09”, \u6b66\u7530\u6b63\u502b \u76e3\u4fee, \u5b66\u7814, 2016(Amazon<\/a>)<\/li>\n
      11. “\u30aa\u30fc\u30d7\u30f3\u30bd\u30fc\u30b9\u3067\u5b66\u3076\u30d0\u30a4\u30aa\u30a4\u30f3\u30d5\u30a9\u30de\u30c6\u30a3\u30af\u30b9”, \u30aa\u30fc\u30d7\u30d0\u30a4\u30aa\u7814\u7a76\u4f1a\u7de8, \u6771\u4eac\u96fb\u6a5f\u5927\u5b66\u51fa\u7248, 2008(Amazon<\/a>)<\/li>\n
      12. “Metabolomics – The Frontier of Systems Biology”, \u5171\u8457, Springer-Verlag, 2005:211-220 (Amazon<\/a>)<\/li>\n
      13. “\u30e1\u30bf\u30dc\u30ed\u30fc\u30e0\u7814\u7a76\u306e\u6700\u524d\u7dda”, \u5171\u8457, \u30b7\u30e5\u30d7\u30ea\u30f3\u30ac\u30fc\u30fb\u30d5\u30a7\u30a2\u30e9\u30fc\u30af, 2003:191-197 (Amazon<\/a>)<\/li>\n<\/ol>\n

         <\/p>\n

        \u00a0<\/span><\/p>\n

         <\/p>\n

        \u00a0Books (Translations)<\/h1>\n

         <\/p>\n

         <\/p>\n

         <\/p>\n

          \n
        1. “R\u3068Bioconductor\u3092\u7528\u3044\u305f\u30d0\u30a4\u30aa\u30a4\u30f3\u30d5\u30a9\u30de\u30c6\u30a3\u30af\u30b9”, \u5171\u8457, \u30b7\u30e5\u30d7\u30ea\u30f3\u30ac\u30fc\u30fb\u30d5\u30a7\u30a2\u30e9\u30fc\u30af, 2007, ISBN 978-4-431-73464-2 (Amazon<\/a>)<\/li>\n<\/ol>\n

           <\/p>\n

          \u00a0<\/span><\/p>\n

           <\/p>\n

          \u00a0Educational Tools<\/h1>\n

           <\/p>\n

           <\/p>\n

           <\/p>\n

            \n
          1. \u201c\u30df\u30af\u30ed\u30e2\u30f3\u30b9\u30bf\u30fcLED\u5185\u81d3\u30ba\u30fc\u30e0\u9855\u5fae\u93e1\uff06\u8abf\u67fb\u30ad\u30c3\u30c8\u201d, \u5b66\u7814\u6559\u80b2\u51fa\u7248, 2015 (Amazon<\/a>)<\/li>\n<\/ol>\n

             <\/p>\n

             <\/p>\n

             <\/p>\n

            \u00a0<\/span><\/p>\n

             <\/p>\n

             <\/p>\n

            [\/et_pb_text][\/et_pb_column][\/et_pb_row][\/et_pb_section][et_pb_section fb_built=”1″ fullwidth=”on” _builder_version=”4.16″ global_colors_info=”{}”][\/et_pb_section]<\/p>\n","protected":false},"excerpt":{"rendered":"

              Publications\u00a0   Shinomiya\u00a0A,\u00a0Oshibuchi\u00a0K,\u00a0Y […]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":3,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_et_pb_use_builder":"on","_et_pb_old_content":"

            <\/span> Peer-Reviewed Publications<\/h1>\r\n\u307b\u3052\u307b\u3052\r\n\r\n\u00a0\r\n\r\n\u00a0","_et_gb_content_width":"","footnotes":""},"class_list":["post-55","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/bioinformatician.org\/glab\/wp-json\/wp\/v2\/pages\/55","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/bioinformatician.org\/glab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/bioinformatician.org\/glab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/bioinformatician.org\/glab\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/bioinformatician.org\/glab\/wp-json\/wp\/v2\/comments?post=55"}],"version-history":[{"count":9,"href":"https:\/\/bioinformatician.org\/glab\/wp-json\/wp\/v2\/pages\/55\/revisions"}],"predecessor-version":[{"id":2336,"href":"https:\/\/bioinformatician.org\/glab\/wp-json\/wp\/v2\/pages\/55\/revisions\/2336"}],"wp:attachment":[{"href":"https:\/\/bioinformatician.org\/glab\/wp-json\/wp\/v2\/media?parent=55"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}